Gene : evm_27.TU.AmTr_v1.0_scaffold00086.64 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11638//PTHR11638:SF116 - ATP-DEPENDENT CLP PROTEASE Genomic Order:  61
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00086.64 Secondary Identifier:  ? PAC:31571514
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00086.64 0.5kb upstream 0.5kb upstream 4486 true AmTr_v1.0_scaffold00086: 1562078-1566563 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00086: 1566064-1566563 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 0.5kb downstream 0.5kb downstream 4486 true AmTr_v1.0_scaffold00086: 1561578-1566063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00086: 1561578-1562077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 1.0kb upstream 1.0kb upstream 4986 true AmTr_v1.0_scaffold00086: 1562078-1567063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00086: 1566064-1567063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 1.0kb downstream 1.0kb downstream 4986 true AmTr_v1.0_scaffold00086: 1561078-1566063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00086: 1561078-1562077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 2.0kb upstream 2.0kb upstream 5986 true AmTr_v1.0_scaffold00086: 1562078-1568063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00086: 1566064-1568063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 2.0kb downstream 2.0kb downstream 5986 true AmTr_v1.0_scaffold00086: 1560078-1566063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00086: 1560078-1562077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 5.0kb upstream 5.0kb upstream 8986 true AmTr_v1.0_scaffold00086: 1562078-1571063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00086: 1566064-1571063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 5.0kb downstream 5.0kb downstream 8986 true AmTr_v1.0_scaffold00086: 1557078-1566063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00086: 1557078-1562077 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 10.0kb upstream 10.0kb upstream 13986 true AmTr_v1.0_scaffold00086: 1562078-1576063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00086: 1566064-1576063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 10.0kb downstream 10.0kb downstream 13986 true AmTr_v1.0_scaffold00086: 1552078-1566063 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.64 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00086: 1552078-1562077 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain