Gene : evm_27.TU.AmTr_v1.0_scaffold00086.58 A. trichopoda v1.0
Defline:  (1 of 2) 2.5.1.84 - All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) / Solanesyl-diphosphate synthase Genomic Order:  56
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00086.58 Secondary Identifier:  ? PAC:31571539
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5805 Amborella trichopoda pathologic  
Atrichopoda PWY-5864 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00086.58 0.5kb upstream 0.5kb upstream 13818 true AmTr_v1.0_scaffold00086: 1394762-1408579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00086: 1394762-1395261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 0.5kb downstream 0.5kb downstream 13818 true AmTr_v1.0_scaffold00086: 1395262-1409079 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00086: 1408580-1409079 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 1.0kb upstream 1.0kb upstream 14318 true AmTr_v1.0_scaffold00086: 1394262-1408579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00086: 1394262-1395261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 1.0kb downstream 1.0kb downstream 14318 true AmTr_v1.0_scaffold00086: 1395262-1409579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00086: 1408580-1409579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 2.0kb upstream 2.0kb upstream 15318 true AmTr_v1.0_scaffold00086: 1393262-1408579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00086: 1393262-1395261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 2.0kb downstream 2.0kb downstream 15318 true AmTr_v1.0_scaffold00086: 1395262-1410579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00086: 1408580-1410579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 5.0kb upstream 5.0kb upstream 18318 true AmTr_v1.0_scaffold00086: 1390262-1408579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00086: 1390262-1395261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 5.0kb downstream 5.0kb downstream 18318 true AmTr_v1.0_scaffold00086: 1395262-1413579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00086: 1408580-1413579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 10.0kb upstream 10.0kb upstream 23318 true AmTr_v1.0_scaffold00086: 1385262-1408579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00086: 1385262-1395261 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 10.0kb downstream 10.0kb downstream 23318 true AmTr_v1.0_scaffold00086: 1395262-1418579 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.58 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00086: 1408580-1418579 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain