Gene : evm_27.TU.AmTr_v1.0_scaffold00086.45 A. trichopoda v1.0
Defline:  (1 of 1) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  43
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00086.45 Secondary Identifier:  ? PAC:31571568
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00086.45 0.5kb upstream 0.5kb upstream 1166 true AmTr_v1.0_scaffold00086: 1076380-1077545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00086: 1076380-1076879 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 0.5kb downstream 0.5kb downstream 1166 true AmTr_v1.0_scaffold00086: 1076880-1078045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00086: 1077546-1078045 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 1.0kb upstream 1.0kb upstream 1666 true AmTr_v1.0_scaffold00086: 1075880-1077545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00086: 1075880-1076879 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 1.0kb downstream 1.0kb downstream 1666 true AmTr_v1.0_scaffold00086: 1076880-1078545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00086: 1077546-1078545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 2.0kb upstream 2.0kb upstream 2666 true AmTr_v1.0_scaffold00086: 1074880-1077545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00086: 1074880-1076879 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 2.0kb downstream 2.0kb downstream 2666 true AmTr_v1.0_scaffold00086: 1076880-1079545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00086: 1077546-1079545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 5.0kb upstream 5.0kb upstream 5666 true AmTr_v1.0_scaffold00086: 1071880-1077545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00086: 1071880-1076879 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 5.0kb downstream 5.0kb downstream 5666 true AmTr_v1.0_scaffold00086: 1076880-1082545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00086: 1077546-1082545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 10.0kb upstream 10.0kb upstream 10666 true AmTr_v1.0_scaffold00086: 1066880-1077545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00086: 1066880-1076879 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 10.0kb downstream 10.0kb downstream 10666 true AmTr_v1.0_scaffold00086: 1076880-1087545 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.45 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00086: 1077546-1087545 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050042 5273 Angiosperm View MSA
121311703 5274 Embryophyte View MSA
123348966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain