Gene : evm_27.TU.AmTr_v1.0_scaffold00087.44 A. trichopoda v1.0
Defline:  (1 of 1) PTHR34803:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT XI, CHLOROPLASTIC Genomic Order:  44
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00087.44 Secondary Identifier:  ? PAC:31559842
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00087.44 0.5kb upstream 0.5kb upstream 2502 true AmTr_v1.0_scaffold00087: 2016065-2018566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00087: 2018067-2018566 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 0.5kb downstream 0.5kb downstream 2502 true AmTr_v1.0_scaffold00087: 2015565-2018066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00087: 2015565-2016064 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 1.0kb upstream 1.0kb upstream 3002 true AmTr_v1.0_scaffold00087: 2016065-2019066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00087: 2018067-2019066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 1.0kb downstream 1.0kb downstream 3002 true AmTr_v1.0_scaffold00087: 2015065-2018066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00087: 2015065-2016064 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 2.0kb upstream 2.0kb upstream 4002 true AmTr_v1.0_scaffold00087: 2016065-2020066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00087: 2018067-2020066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 2.0kb downstream 2.0kb downstream 4002 true AmTr_v1.0_scaffold00087: 2014065-2018066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00087: 2014065-2016064 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 5.0kb upstream 5.0kb upstream 7002 true AmTr_v1.0_scaffold00087: 2016065-2023066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00087: 2018067-2023066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 5.0kb downstream 5.0kb downstream 7002 true AmTr_v1.0_scaffold00087: 2011065-2018066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00087: 2011065-2016064 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 10.0kb upstream 10.0kb upstream 12002 true AmTr_v1.0_scaffold00087: 2016065-2028066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00087: 2018067-2028066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 10.0kb downstream 10.0kb downstream 12002 true AmTr_v1.0_scaffold00087: 2006065-2018066 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00087.44 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00087: 2006065-2016064 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain