Gene : evm_27.TU.AmTr_v1.0_scaffold00086.75 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22975 - UBIQUITIN SPECIFIC PROTEINASE Genomic Order:  72
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00086.75 Secondary Identifier:  ? PAC:31571546
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00086.75 0.5kb upstream 0.5kb upstream 38897 true AmTr_v1.0_scaffold00086: 1842427-1881323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00086: 1842427-1842926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 0.5kb downstream 0.5kb downstream 38897 true AmTr_v1.0_scaffold00086: 1842927-1881823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00086: 1881324-1881823 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 1.0kb upstream 1.0kb upstream 39397 true AmTr_v1.0_scaffold00086: 1841927-1881323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00086: 1841927-1842926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 1.0kb downstream 1.0kb downstream 39397 true AmTr_v1.0_scaffold00086: 1842927-1882323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00086: 1881324-1882323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 2.0kb upstream 2.0kb upstream 40397 true AmTr_v1.0_scaffold00086: 1840927-1881323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00086: 1840927-1842926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 2.0kb downstream 2.0kb downstream 40397 true AmTr_v1.0_scaffold00086: 1842927-1883323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00086: 1881324-1883323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 5.0kb upstream 5.0kb upstream 43397 true AmTr_v1.0_scaffold00086: 1837927-1881323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00086: 1837927-1842926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 5.0kb downstream 5.0kb downstream 43397 true AmTr_v1.0_scaffold00086: 1842927-1886323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00086: 1881324-1886323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 10.0kb upstream 10.0kb upstream 48397 true AmTr_v1.0_scaffold00086: 1832927-1881323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00086: 1832927-1842926 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 10.0kb downstream 10.0kb downstream 48397 true AmTr_v1.0_scaffold00086: 1842927-1891323 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00086.75 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00086: 1881324-1891323 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain