Gene : evm_27.TU.AmTr_v1.0_scaffold00085.3 A. trichopoda v1.0
Defline:  (1 of 2) 2.2.1.2 - Transaldolase / Glycerone transferase Genomic Order:  3
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00085.3 Secondary Identifier:  ? PAC:31556297
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda NONOXIPENT-PWY Amborella trichopoda pathologic  
Atrichopoda PENTOSE-P-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5723 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00085.3 0.5kb upstream 0.5kb upstream 26091 true AmTr_v1.0_scaffold00085: 76823-102913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00085: 76823-77322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 0.5kb downstream 0.5kb downstream 26091 true AmTr_v1.0_scaffold00085: 77323-103413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00085: 102914-103413 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 1.0kb upstream 1.0kb upstream 26591 true AmTr_v1.0_scaffold00085: 76323-102913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00085: 76323-77322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 1.0kb downstream 1.0kb downstream 26591 true AmTr_v1.0_scaffold00085: 77323-103913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00085: 102914-103913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 2.0kb upstream 2.0kb upstream 27591 true AmTr_v1.0_scaffold00085: 75323-102913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00085: 75323-77322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 2.0kb downstream 2.0kb downstream 27591 true AmTr_v1.0_scaffold00085: 77323-104913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00085: 102914-104913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 5.0kb upstream 5.0kb upstream 30591 true AmTr_v1.0_scaffold00085: 72323-102913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00085: 72323-77322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 5.0kb downstream 5.0kb downstream 30591 true AmTr_v1.0_scaffold00085: 77323-107913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00085: 102914-107913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 10.0kb upstream 10.0kb upstream 35591 true AmTr_v1.0_scaffold00085: 67323-102913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00085: 67323-77322 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 10.0kb downstream 10.0kb downstream 35591 true AmTr_v1.0_scaffold00085: 77323-112913 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.3 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00085: 102914-112913 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043979 5273 Angiosperm View MSA
121346789 5274 Embryophyte View MSA
123424119 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain