Gene : evm_27.TU.AmTr_v1.0_scaffold00085.93 A. trichopoda v1.0
Defline:  (1 of 1) PTHR24031:SF145 - CRISPR-ASSOCIATED ENDONUCLEASE/HELICASE CAS3 Genomic Order:  90
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00085.93 Secondary Identifier:  ? PAC:31556365
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00085.93 0.5kb upstream 0.5kb upstream 48721 true AmTr_v1.0_scaffold00085: 2204377-2253097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00085: 2204377-2204876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 0.5kb downstream 0.5kb downstream 48721 true AmTr_v1.0_scaffold00085: 2204877-2253597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00085: 2253098-2253597 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 1.0kb upstream 1.0kb upstream 49221 true AmTr_v1.0_scaffold00085: 2203877-2253097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00085: 2203877-2204876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 1.0kb downstream 1.0kb downstream 49221 true AmTr_v1.0_scaffold00085: 2204877-2254097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00085: 2253098-2254097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 2.0kb upstream 2.0kb upstream 50221 true AmTr_v1.0_scaffold00085: 2202877-2253097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00085: 2202877-2204876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 2.0kb downstream 2.0kb downstream 50221 true AmTr_v1.0_scaffold00085: 2204877-2255097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00085: 2253098-2255097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 5.0kb upstream 5.0kb upstream 53221 true AmTr_v1.0_scaffold00085: 2199877-2253097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00085: 2199877-2204876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 5.0kb downstream 5.0kb downstream 53221 true AmTr_v1.0_scaffold00085: 2204877-2258097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00085: 2253098-2258097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 10.0kb upstream 10.0kb upstream 58221 true AmTr_v1.0_scaffold00085: 2194877-2253097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00085: 2194877-2204876 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 10.0kb downstream 10.0kb downstream 58221 true AmTr_v1.0_scaffold00085: 2204877-2263097 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.93 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00085: 2253098-2263097 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045198 5273 Angiosperm View MSA
121347871 5274 Embryophyte View MSA
123426910 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain