Gene : evm_27.TU.AmTr_v1.0_scaffold00085.60 A. trichopoda v1.0
Defline:  (1 of 26) PF00582 - Universal stress protein family (Usp) Genomic Order:  59
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00085.60 Secondary Identifier:  ? PAC:31556304
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00085.60 0.5kb upstream 0.5kb upstream 14677 true AmTr_v1.0_scaffold00085: 1210316-1224992 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00085: 1224493-1224992 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 0.5kb downstream 0.5kb downstream 14677 true AmTr_v1.0_scaffold00085: 1209816-1224492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00085: 1209816-1210315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 1.0kb upstream 1.0kb upstream 15177 true AmTr_v1.0_scaffold00085: 1210316-1225492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00085: 1224493-1225492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 1.0kb downstream 1.0kb downstream 15177 true AmTr_v1.0_scaffold00085: 1209316-1224492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00085: 1209316-1210315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 2.0kb upstream 2.0kb upstream 16177 true AmTr_v1.0_scaffold00085: 1210316-1226492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00085: 1224493-1226492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 2.0kb downstream 2.0kb downstream 16177 true AmTr_v1.0_scaffold00085: 1208316-1224492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00085: 1208316-1210315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 5.0kb upstream 5.0kb upstream 19177 true AmTr_v1.0_scaffold00085: 1210316-1229492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00085: 1224493-1229492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 5.0kb downstream 5.0kb downstream 19177 true AmTr_v1.0_scaffold00085: 1205316-1224492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00085: 1205316-1210315 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 10.0kb upstream 10.0kb upstream 24177 true AmTr_v1.0_scaffold00085: 1210316-1234492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00085: 1224493-1234492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 10.0kb downstream 10.0kb downstream 24177 true AmTr_v1.0_scaffold00085: 1200316-1224492 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00085.60 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00085: 1200316-1210315 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048128 5273 Angiosperm View MSA
121348607 5274 Embryophyte View MSA
123427901 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain