Gene : evm_27.TU.AmTr_v1.0_scaffold00082.20 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11941:SF94 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  20
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00082.20 Secondary Identifier:  ? PAC:31552686
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7574 Amborella trichopoda pathologic  
Atrichopoda VALDEG-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00082.20 0.5kb upstream 0.5kb upstream 13256 true AmTr_v1.0_scaffold00082: 1299566-1312821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00082: 1299566-1300065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 0.5kb downstream 0.5kb downstream 13256 true AmTr_v1.0_scaffold00082: 1300066-1313321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00082: 1312822-1313321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 1.0kb upstream 1.0kb upstream 13756 true AmTr_v1.0_scaffold00082: 1299066-1312821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00082: 1299066-1300065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 1.0kb downstream 1.0kb downstream 13756 true AmTr_v1.0_scaffold00082: 1300066-1313821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00082: 1312822-1313821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 2.0kb upstream 2.0kb upstream 14756 true AmTr_v1.0_scaffold00082: 1298066-1312821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00082: 1298066-1300065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 2.0kb downstream 2.0kb downstream 14756 true AmTr_v1.0_scaffold00082: 1300066-1314821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00082: 1312822-1314821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 5.0kb upstream 5.0kb upstream 17756 true AmTr_v1.0_scaffold00082: 1295066-1312821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00082: 1295066-1300065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 5.0kb downstream 5.0kb downstream 17756 true AmTr_v1.0_scaffold00082: 1300066-1317821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00082: 1312822-1317821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 10.0kb upstream 10.0kb upstream 22756 true AmTr_v1.0_scaffold00082: 1290066-1312821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00082: 1290066-1300065 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 10.0kb downstream 10.0kb downstream 22756 true AmTr_v1.0_scaffold00082: 1300066-1322821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00082.20 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00082: 1312822-1322821 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain