Gene : evm_27.TU.AmTr_v1.0_scaffold00081.63 A. trichopoda v1.0
Defline:  (1 of 2) PTHR23321//PTHR23321:SF33 - RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR Genomic Order:  63
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00081.63 Secondary Identifier:  ? PAC:31563856
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda CALVIN-PWY Amborella trichopoda pathologic  
Atrichopoda PHOTOALL-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-5723 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00081.63 0.5kb upstream 0.5kb upstream 866 true AmTr_v1.0_scaffold00081: 2267782-2268647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00081: 2267782-2268281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 0.5kb downstream 0.5kb downstream 866 true AmTr_v1.0_scaffold00081: 2268282-2269147 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00081: 2268648-2269147 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 1.0kb upstream 1.0kb upstream 1366 true AmTr_v1.0_scaffold00081: 2267282-2268647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00081: 2267282-2268281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 1.0kb downstream 1.0kb downstream 1366 true AmTr_v1.0_scaffold00081: 2268282-2269647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00081: 2268648-2269647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 2.0kb upstream 2.0kb upstream 2366 true AmTr_v1.0_scaffold00081: 2266282-2268647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00081: 2266282-2268281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 2.0kb downstream 2.0kb downstream 2366 true AmTr_v1.0_scaffold00081: 2268282-2270647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00081: 2268648-2270647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 5.0kb upstream 5.0kb upstream 5366 true AmTr_v1.0_scaffold00081: 2263282-2268647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00081: 2263282-2268281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 5.0kb downstream 5.0kb downstream 5366 true AmTr_v1.0_scaffold00081: 2268282-2273647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00081: 2268648-2273647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 10.0kb upstream 10.0kb upstream 10366 true AmTr_v1.0_scaffold00081: 2258282-2268647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00081: 2258282-2268281 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 10.0kb downstream 10.0kb downstream 10366 true AmTr_v1.0_scaffold00081: 2268282-2278647 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00081.63 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00081: 2268648-2278647 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain