Gene : evm_27.TU.AmTr_v1.0_scaffold00084.35 A. trichopoda v1.0
Defline:  (1 of 1) PTHR33231:SF1 - 30S RIBOSOMAL PROTEIN-RELATED Genomic Order:  35
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00084.35 Secondary Identifier:  ? PAC:31555175
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00084.35 0.5kb upstream 0.5kb upstream 18320 true AmTr_v1.0_scaffold00084: 1527672-1545991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00084: 1527672-1528171 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 0.5kb downstream 0.5kb downstream 18320 true AmTr_v1.0_scaffold00084: 1528172-1546491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00084: 1545992-1546491 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 1.0kb upstream 1.0kb upstream 18820 true AmTr_v1.0_scaffold00084: 1527172-1545991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00084: 1527172-1528171 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 1.0kb downstream 1.0kb downstream 18820 true AmTr_v1.0_scaffold00084: 1528172-1546991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00084: 1545992-1546991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 2.0kb upstream 2.0kb upstream 19820 true AmTr_v1.0_scaffold00084: 1526172-1545991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00084: 1526172-1528171 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 2.0kb downstream 2.0kb downstream 19820 true AmTr_v1.0_scaffold00084: 1528172-1547991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00084: 1545992-1547991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 5.0kb upstream 5.0kb upstream 22820 true AmTr_v1.0_scaffold00084: 1523172-1545991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00084: 1523172-1528171 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 5.0kb downstream 5.0kb downstream 22820 true AmTr_v1.0_scaffold00084: 1528172-1550991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00084: 1545992-1550991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 10.0kb upstream 10.0kb upstream 27820 true AmTr_v1.0_scaffold00084: 1518172-1545991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00084: 1518172-1528171 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 10.0kb downstream 10.0kb downstream 27820 true AmTr_v1.0_scaffold00084: 1528172-1555991 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.35 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00084: 1545992-1555991 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044034 5273 Angiosperm View MSA
121345807 5274 Embryophyte View MSA
123423894 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain