Gene : evm_27.TU.AmTr_v1.0_scaffold00084.24 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  24
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00084.24 Secondary Identifier:  ? PAC:31555207
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00084.24 0.5kb upstream 0.5kb upstream 2807 true AmTr_v1.0_scaffold00084: 1032320-1035126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00084: 1032320-1032819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 0.5kb downstream 0.5kb downstream 2807 true AmTr_v1.0_scaffold00084: 1032820-1035626 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00084: 1035127-1035626 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 1.0kb upstream 1.0kb upstream 3307 true AmTr_v1.0_scaffold00084: 1031820-1035126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00084: 1031820-1032819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 1.0kb downstream 1.0kb downstream 3307 true AmTr_v1.0_scaffold00084: 1032820-1036126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00084: 1035127-1036126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 2.0kb upstream 2.0kb upstream 4307 true AmTr_v1.0_scaffold00084: 1030820-1035126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00084: 1030820-1032819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 2.0kb downstream 2.0kb downstream 4307 true AmTr_v1.0_scaffold00084: 1032820-1037126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00084: 1035127-1037126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 5.0kb upstream 5.0kb upstream 7307 true AmTr_v1.0_scaffold00084: 1027820-1035126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00084: 1027820-1032819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 5.0kb downstream 5.0kb downstream 7307 true AmTr_v1.0_scaffold00084: 1032820-1040126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00084: 1035127-1040126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 10.0kb upstream 10.0kb upstream 12307 true AmTr_v1.0_scaffold00084: 1022820-1035126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00084: 1022820-1032819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 10.0kb downstream 10.0kb downstream 12307 true AmTr_v1.0_scaffold00084: 1032820-1045126 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00084.24 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00084: 1035127-1045126 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050004 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain