Gene : evm_27.TU.AmTr_v1.0_scaffold00093.31 A. trichopoda v1.0
Defline:  (1 of 1) 2.5.1.39 - 4-hydroxybenzoate polyprenyltransferase / 4-hydroxybenzoate nonaprenyltransferase Genomic Order:  30
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00093.31 Secondary Identifier:  ? PAC:31569184
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5871 Amborella trichopoda pathologic  
Atrichopoda PWY-5872 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00093.31 0.5kb upstream 0.5kb upstream 18408 true AmTr_v1.0_scaffold00093: 1120385-1138792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00093: 1138293-1138792 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 0.5kb downstream 0.5kb downstream 18408 true AmTr_v1.0_scaffold00093: 1119885-1138292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00093: 1119885-1120384 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 1.0kb upstream 1.0kb upstream 18908 true AmTr_v1.0_scaffold00093: 1120385-1139292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00093: 1138293-1139292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 1.0kb downstream 1.0kb downstream 18908 true AmTr_v1.0_scaffold00093: 1119385-1138292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00093: 1119385-1120384 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 2.0kb upstream 2.0kb upstream 19908 true AmTr_v1.0_scaffold00093: 1120385-1140292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00093: 1138293-1140292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 2.0kb downstream 2.0kb downstream 19908 true AmTr_v1.0_scaffold00093: 1118385-1138292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00093: 1118385-1120384 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 5.0kb upstream 5.0kb upstream 22908 true AmTr_v1.0_scaffold00093: 1120385-1143292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00093: 1138293-1143292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 5.0kb downstream 5.0kb downstream 22908 true AmTr_v1.0_scaffold00093: 1115385-1138292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00093: 1115385-1120384 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 10.0kb upstream 10.0kb upstream 27908 true AmTr_v1.0_scaffold00093: 1120385-1148292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00093: 1138293-1148292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 10.0kb downstream 10.0kb downstream 27908 true AmTr_v1.0_scaffold00093: 1110385-1138292 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00093.31 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00093: 1110385-1120384 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042592 5273 Angiosperm View MSA
121344514 5274 Embryophyte View MSA
123428392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain