Gene : evm_27.TU.AmTr_v1.0_scaffold00092.140 A. trichopoda v1.0
Defline:  (1 of 4) KOG0409 - Predicted dehydrogenase Genomic Order:  136
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00092.140 Secondary Identifier:  ? PAC:31552164
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda VALDEG-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00092.140 0.5kb upstream 0.5kb upstream 7699 true AmTr_v1.0_scaffold00092: 2537747-2545445 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00092: 2544946-2545445 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 0.5kb downstream 0.5kb downstream 7699 true AmTr_v1.0_scaffold00092: 2537247-2544945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00092: 2537247-2537746 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 1.0kb upstream 1.0kb upstream 8199 true AmTr_v1.0_scaffold00092: 2537747-2545945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00092: 2544946-2545945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 1.0kb downstream 1.0kb downstream 8199 true AmTr_v1.0_scaffold00092: 2536747-2544945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00092: 2536747-2537746 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 2.0kb upstream 2.0kb upstream 9199 true AmTr_v1.0_scaffold00092: 2537747-2546945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00092: 2544946-2546945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 2.0kb downstream 2.0kb downstream 9199 true AmTr_v1.0_scaffold00092: 2535747-2544945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00092: 2535747-2537746 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 5.0kb upstream 5.0kb upstream 12199 true AmTr_v1.0_scaffold00092: 2537747-2549945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00092: 2544946-2549945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 5.0kb downstream 5.0kb downstream 12199 true AmTr_v1.0_scaffold00092: 2532747-2544945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00092: 2532747-2537746 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 10.0kb upstream 10.0kb upstream 17199 true AmTr_v1.0_scaffold00092: 2537747-2554945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00092: 2544946-2554945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 10.0kb downstream 10.0kb downstream 17199 true AmTr_v1.0_scaffold00092: 2527747-2544945 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.140 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00092: 2527747-2537746 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain