Gene : evm_27.TU.AmTr_v1.0_scaffold00092.129 A. trichopoda v1.0
Defline:  (1 of 1) PTHR28595:SF1 - 39S RIBOSOMAL PROTEIN L54, MITOCHONDRIAL Genomic Order:  125
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00092.129 Secondary Identifier:  ? PAC:31552085
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00092.129 0.5kb upstream 0.5kb upstream 893 true AmTr_v1.0_scaffold00092: 2352529-2353421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00092: 2352922-2353421 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 0.5kb downstream 0.5kb downstream 893 true AmTr_v1.0_scaffold00092: 2352029-2352921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00092: 2352029-2352528 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 1.0kb upstream 1.0kb upstream 1393 true AmTr_v1.0_scaffold00092: 2352529-2353921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00092: 2352922-2353921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 1.0kb downstream 1.0kb downstream 1393 true AmTr_v1.0_scaffold00092: 2351529-2352921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00092: 2351529-2352528 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 2.0kb upstream 2.0kb upstream 2393 true AmTr_v1.0_scaffold00092: 2352529-2354921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00092: 2352922-2354921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 2.0kb downstream 2.0kb downstream 2393 true AmTr_v1.0_scaffold00092: 2350529-2352921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00092: 2350529-2352528 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 5.0kb upstream 5.0kb upstream 5393 true AmTr_v1.0_scaffold00092: 2352529-2357921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00092: 2352922-2357921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 5.0kb downstream 5.0kb downstream 5393 true AmTr_v1.0_scaffold00092: 2347529-2352921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00092: 2347529-2352528 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 10.0kb upstream 10.0kb upstream 10393 true AmTr_v1.0_scaffold00092: 2352529-2362921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00092: 2352922-2362921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 10.0kb downstream 10.0kb downstream 10393 true AmTr_v1.0_scaffold00092: 2342529-2352921 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.129 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00092: 2342529-2352528 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046066 5273 Angiosperm View MSA
121350806 5274 Embryophyte View MSA
123425089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain