Gene : evm_27.TU.AmTr_v1.0_scaffold00092.17 A. trichopoda v1.0
Defline:  (1 of 15) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  17
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00092.17 Secondary Identifier:  ? PAC:31552082
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00092.17 0.5kb upstream 0.5kb upstream 8644 true AmTr_v1.0_scaffold00092: 352656-361299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00092: 352656-353155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 0.5kb downstream 0.5kb downstream 8644 true AmTr_v1.0_scaffold00092: 353156-361799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00092: 361300-361799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 1.0kb upstream 1.0kb upstream 9144 true AmTr_v1.0_scaffold00092: 352156-361299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00092: 352156-353155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 1.0kb downstream 1.0kb downstream 9144 true AmTr_v1.0_scaffold00092: 353156-362299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00092: 361300-362299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 2.0kb upstream 2.0kb upstream 10144 true AmTr_v1.0_scaffold00092: 351156-361299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00092: 351156-353155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 2.0kb downstream 2.0kb downstream 10144 true AmTr_v1.0_scaffold00092: 353156-363299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00092: 361300-363299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 5.0kb upstream 5.0kb upstream 13144 true AmTr_v1.0_scaffold00092: 348156-361299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00092: 348156-353155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 5.0kb downstream 5.0kb downstream 13144 true AmTr_v1.0_scaffold00092: 353156-366299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00092: 361300-366299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 10.0kb upstream 10.0kb upstream 18144 true AmTr_v1.0_scaffold00092: 343156-361299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00092: 343156-353155 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 10.0kb downstream 10.0kb downstream 18144 true AmTr_v1.0_scaffold00092: 353156-371299 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00092.17 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00092: 361300-371299 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046069 5273 Angiosperm View MSA
121347106 5274 Embryophyte View MSA
123380493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain