Gene : evm_27.TU.AmTr_v1.0_scaffold00089.46 A. trichopoda v1.0
Defline:  (1 of 2) PF01805//PF04818 - Surp module (Surp) // RNA polymerase II-binding domain. (CTD_bind) Genomic Order:  46
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00089.46 Secondary Identifier:  ? PAC:31549621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00089.46 0.5kb upstream 0.5kb upstream 20662 true AmTr_v1.0_scaffold00089: 1042103-1062764 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00089: 1062265-1062764 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 0.5kb downstream 0.5kb downstream 20662 true AmTr_v1.0_scaffold00089: 1041603-1062264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00089: 1041603-1042102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 1.0kb upstream 1.0kb upstream 21162 true AmTr_v1.0_scaffold00089: 1042103-1063264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00089: 1062265-1063264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 1.0kb downstream 1.0kb downstream 21162 true AmTr_v1.0_scaffold00089: 1041103-1062264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00089: 1041103-1042102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 2.0kb upstream 2.0kb upstream 22162 true AmTr_v1.0_scaffold00089: 1042103-1064264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00089: 1062265-1064264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 2.0kb downstream 2.0kb downstream 22162 true AmTr_v1.0_scaffold00089: 1040103-1062264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00089: 1040103-1042102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 5.0kb upstream 5.0kb upstream 25162 true AmTr_v1.0_scaffold00089: 1042103-1067264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00089: 1062265-1067264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 5.0kb downstream 5.0kb downstream 25162 true AmTr_v1.0_scaffold00089: 1037103-1062264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00089: 1037103-1042102 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 10.0kb upstream 10.0kb upstream 30162 true AmTr_v1.0_scaffold00089: 1042103-1072264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00089: 1062265-1072264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 10.0kb downstream 10.0kb downstream 30162 true AmTr_v1.0_scaffold00089: 1032103-1062264 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00089.46 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00089: 1032103-1042102 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044059 5273 Angiosperm View MSA
121346189 5274 Embryophyte View MSA
123424893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain