Gene : evm_27.TU.AmTr_v1.0_scaffold00090.12 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  12
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00090.12 Secondary Identifier:  ? PAC:31575095
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00090.12 0.5kb upstream 0.5kb upstream 8373 true AmTr_v1.0_scaffold00090: 470535-478907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00090: 470535-471034 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 0.5kb downstream 0.5kb downstream 8373 true AmTr_v1.0_scaffold00090: 471035-479407 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00090: 478908-479407 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 1.0kb upstream 1.0kb upstream 8873 true AmTr_v1.0_scaffold00090: 470035-478907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00090: 470035-471034 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 1.0kb downstream 1.0kb downstream 8873 true AmTr_v1.0_scaffold00090: 471035-479907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00090: 478908-479907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 2.0kb upstream 2.0kb upstream 9873 true AmTr_v1.0_scaffold00090: 469035-478907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00090: 469035-471034 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 2.0kb downstream 2.0kb downstream 9873 true AmTr_v1.0_scaffold00090: 471035-480907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00090: 478908-480907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 5.0kb upstream 5.0kb upstream 12873 true AmTr_v1.0_scaffold00090: 466035-478907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00090: 466035-471034 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 5.0kb downstream 5.0kb downstream 12873 true AmTr_v1.0_scaffold00090: 471035-483907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00090: 478908-483907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 10.0kb upstream 10.0kb upstream 17873 true AmTr_v1.0_scaffold00090: 461035-478907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00090: 461035-471034 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 10.0kb downstream 10.0kb downstream 17873 true AmTr_v1.0_scaffold00090: 471035-488907 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00090.12 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00090: 478908-488907 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain