Gene : evm_27.TU.AmTr_v1.0_scaffold00099.105 A. trichopoda v1.0

Defline:  (1 of 1) PTHR11214:SF125 - BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED Genomic Order:  104
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00099.105 Secondary Identifier:  ? PAC:31570459

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00099.105 0.5kb upstream 0.5kb upstream 10247 true AmTr_v1.0_scaffold00099: 1644706-1654952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00099: 1644706-1645205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 0.5kb downstream 0.5kb downstream 10247 true AmTr_v1.0_scaffold00099: 1645206-1655452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00099: 1654953-1655452 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 1.0kb upstream 1.0kb upstream 10747 true AmTr_v1.0_scaffold00099: 1644206-1654952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00099: 1644206-1645205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 1.0kb downstream 1.0kb downstream 10747 true AmTr_v1.0_scaffold00099: 1645206-1655952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00099: 1654953-1655952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 2.0kb upstream 2.0kb upstream 11747 true AmTr_v1.0_scaffold00099: 1643206-1654952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00099: 1643206-1645205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 2.0kb downstream 2.0kb downstream 11747 true AmTr_v1.0_scaffold00099: 1645206-1656952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00099: 1654953-1656952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 5.0kb upstream 5.0kb upstream 14747 true AmTr_v1.0_scaffold00099: 1640206-1654952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00099: 1640206-1645205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 5.0kb downstream 5.0kb downstream 14747 true AmTr_v1.0_scaffold00099: 1645206-1659952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00099: 1654953-1659952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 10.0kb upstream 10.0kb upstream 19747 true AmTr_v1.0_scaffold00099: 1635206-1654952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00099: 1635206-1645205 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 10.0kb downstream 10.0kb downstream 19747 true AmTr_v1.0_scaffold00099: 1645206-1664952 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00099.105 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00099: 1654953-1664952 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain