Gene : evm_27.TU.AmTr_v1.0_scaffold00096.66 A. trichopoda v1.0
Defline:  (1 of 1) 4.1.3.36 - 1,4-dihydroxy-2-naphthoyl-CoA synthase / o-succinylbenzoyl-CoA 1,4-dihydroxy-2-naphthoate-lyase (cyclizing) Genomic Order:  65
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00096.66 Secondary Identifier:  ? PAC:31573244
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5837 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00096.66 0.5kb upstream 0.5kb upstream 44726 true AmTr_v1.0_scaffold00096: 1335399-1380124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00096: 1335399-1335898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 0.5kb downstream 0.5kb downstream 44726 true AmTr_v1.0_scaffold00096: 1335899-1380624 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00096: 1380125-1380624 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 1.0kb upstream 1.0kb upstream 45226 true AmTr_v1.0_scaffold00096: 1334899-1380124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00096: 1334899-1335898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 1.0kb downstream 1.0kb downstream 45226 true AmTr_v1.0_scaffold00096: 1335899-1381124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00096: 1380125-1381124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 2.0kb upstream 2.0kb upstream 46226 true AmTr_v1.0_scaffold00096: 1333899-1380124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00096: 1333899-1335898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 2.0kb downstream 2.0kb downstream 46226 true AmTr_v1.0_scaffold00096: 1335899-1382124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00096: 1380125-1382124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 5.0kb upstream 5.0kb upstream 49226 true AmTr_v1.0_scaffold00096: 1330899-1380124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00096: 1330899-1335898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 5.0kb downstream 5.0kb downstream 49226 true AmTr_v1.0_scaffold00096: 1335899-1385124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00096: 1380125-1385124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 10.0kb upstream 10.0kb upstream 54226 true AmTr_v1.0_scaffold00096: 1325899-1380124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00096: 1325899-1335898 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 10.0kb downstream 10.0kb downstream 54226 true AmTr_v1.0_scaffold00096: 1335899-1390124 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00096.66 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00096: 1380125-1390124 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043180 5273 Angiosperm View MSA
121346128 5274 Embryophyte View MSA
123423771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain