Gene : evm_27.TU.AmTr_v1.0_scaffold00095.58 A. trichopoda v1.0
Defline:  (1 of 1) 2.5.1.27//2.5.1.75 - Adenylate dimethylallyltransferase (AMP-dependent) / Isopentenyltransferase // tRNA dimethylallyltransferase / tRNA prenyltransferase Genomic Order:  57
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00095.58 Secondary Identifier:  ? PAC:31558964
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-2681 Amborella trichopoda pathologic  
Atrichopoda PWY-2781 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00095.58 0.5kb upstream 0.5kb upstream 12265 true AmTr_v1.0_scaffold00095: 1177896-1190160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00095: 1189661-1190160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 0.5kb downstream 0.5kb downstream 12265 true AmTr_v1.0_scaffold00095: 1177396-1189660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00095: 1177396-1177895 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 1.0kb upstream 1.0kb upstream 12765 true AmTr_v1.0_scaffold00095: 1177896-1190660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00095: 1189661-1190660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 1.0kb downstream 1.0kb downstream 12765 true AmTr_v1.0_scaffold00095: 1176896-1189660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00095: 1176896-1177895 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 2.0kb upstream 2.0kb upstream 13765 true AmTr_v1.0_scaffold00095: 1177896-1191660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00095: 1189661-1191660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 2.0kb downstream 2.0kb downstream 13765 true AmTr_v1.0_scaffold00095: 1175896-1189660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00095: 1175896-1177895 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 5.0kb upstream 5.0kb upstream 16765 true AmTr_v1.0_scaffold00095: 1177896-1194660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00095: 1189661-1194660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 5.0kb downstream 5.0kb downstream 16765 true AmTr_v1.0_scaffold00095: 1172896-1189660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00095: 1172896-1177895 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 10.0kb upstream 10.0kb upstream 21765 true AmTr_v1.0_scaffold00095: 1177896-1199660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00095: 1189661-1199660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 10.0kb downstream 10.0kb downstream 21765 true AmTr_v1.0_scaffold00095: 1167896-1189660 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.58 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00095: 1167896-1177895 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043118 5273 Angiosperm View MSA
121350682 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain