Gene : evm_27.TU.AmTr_v1.0_scaffold00095.43 A. trichopoda v1.0
Defline:  (1 of 2) 2.7.8.7 - Holo-[acyl-carrier-protein] synthase / PPTase Genomic Order:  42
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00095.43 Secondary Identifier:  ? PAC:31558878
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6012-1 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00095.43 0.5kb upstream 0.5kb upstream 3032 true AmTr_v1.0_scaffold00095: 835901-838932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00095: 838433-838932 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 0.5kb downstream 0.5kb downstream 3032 true AmTr_v1.0_scaffold00095: 835401-838432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00095: 835401-835900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 1.0kb upstream 1.0kb upstream 3532 true AmTr_v1.0_scaffold00095: 835901-839432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00095: 838433-839432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 1.0kb downstream 1.0kb downstream 3532 true AmTr_v1.0_scaffold00095: 834901-838432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00095: 834901-835900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 2.0kb upstream 2.0kb upstream 4532 true AmTr_v1.0_scaffold00095: 835901-840432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00095: 838433-840432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 2.0kb downstream 2.0kb downstream 4532 true AmTr_v1.0_scaffold00095: 833901-838432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00095: 833901-835900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 5.0kb upstream 5.0kb upstream 7532 true AmTr_v1.0_scaffold00095: 835901-843432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00095: 838433-843432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 5.0kb downstream 5.0kb downstream 7532 true AmTr_v1.0_scaffold00095: 830901-838432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00095: 830901-835900 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 10.0kb upstream 10.0kb upstream 12532 true AmTr_v1.0_scaffold00095: 835901-848432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00095: 838433-848432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 10.0kb downstream 10.0kb downstream 12532 true AmTr_v1.0_scaffold00095: 825901-838432 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.43 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00095: 825901-835900 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048448 5273 Angiosperm View MSA
123429078 5275 Viridiplantae View MSA
121348212 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain