Gene : evm_27.TU.AmTr_v1.0_scaffold00095.4 A. trichopoda v1.0
Defline:  (1 of 14) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  4
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00095.4 Secondary Identifier:  ? PAC:31559011
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00095.4 0.5kb upstream 0.5kb upstream 64321 true AmTr_v1.0_scaffold00095: 75338-139658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00095: 75338-75837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 0.5kb downstream 0.5kb downstream 64321 true AmTr_v1.0_scaffold00095: 75838-140158 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00095: 139659-140158 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 1.0kb upstream 1.0kb upstream 64821 true AmTr_v1.0_scaffold00095: 74838-139658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00095: 74838-75837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 1.0kb downstream 1.0kb downstream 64821 true AmTr_v1.0_scaffold00095: 75838-140658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00095: 139659-140658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 2.0kb upstream 2.0kb upstream 65821 true AmTr_v1.0_scaffold00095: 73838-139658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00095: 73838-75837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 2.0kb downstream 2.0kb downstream 65821 true AmTr_v1.0_scaffold00095: 75838-141658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00095: 139659-141658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 5.0kb upstream 5.0kb upstream 68821 true AmTr_v1.0_scaffold00095: 70838-139658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00095: 70838-75837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 5.0kb downstream 5.0kb downstream 68821 true AmTr_v1.0_scaffold00095: 75838-144658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00095: 139659-144658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 10.0kb upstream 10.0kb upstream 73821 true AmTr_v1.0_scaffold00095: 65838-139658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00095: 65838-75837 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 10.0kb downstream 10.0kb downstream 73821 true AmTr_v1.0_scaffold00095: 75838-149658 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.4 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00095: 139659-149658 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain