Gene : evm_27.TU.AmTr_v1.0_scaffold00095.93 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21098 - RIBOFLAVIN SYNTHASE ALPHA CHAIN Genomic Order:  91
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00095.93 Secondary Identifier:  ? PAC:31558904
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda RIBOSYN2-PWY Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00095.93 0.5kb upstream 0.5kb upstream 1373 true AmTr_v1.0_scaffold00095: 1803870-1805242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00095: 1803870-1804369 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 0.5kb downstream 0.5kb downstream 1373 true AmTr_v1.0_scaffold00095: 1804370-1805742 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00095: 1805243-1805742 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 1.0kb upstream 1.0kb upstream 1873 true AmTr_v1.0_scaffold00095: 1803370-1805242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00095: 1803370-1804369 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 1.0kb downstream 1.0kb downstream 1873 true AmTr_v1.0_scaffold00095: 1804370-1806242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00095: 1805243-1806242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 2.0kb upstream 2.0kb upstream 2873 true AmTr_v1.0_scaffold00095: 1802370-1805242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00095: 1802370-1804369 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 2.0kb downstream 2.0kb downstream 2873 true AmTr_v1.0_scaffold00095: 1804370-1807242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00095: 1805243-1807242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 5.0kb upstream 5.0kb upstream 5873 true AmTr_v1.0_scaffold00095: 1799370-1805242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00095: 1799370-1804369 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 5.0kb downstream 5.0kb downstream 5873 true AmTr_v1.0_scaffold00095: 1804370-1810242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00095: 1805243-1810242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 10.0kb upstream 10.0kb upstream 10873 true AmTr_v1.0_scaffold00095: 1794370-1805242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00095: 1794370-1804369 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 10.0kb downstream 10.0kb downstream 10873 true AmTr_v1.0_scaffold00095: 1804370-1815242 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00095.93 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00095: 1805243-1815242 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043158 5273 Angiosperm View MSA
121344512 5274 Embryophyte View MSA
123423798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain