Gene : evm_27.TU.AmTr_v1.0_scaffold00106.2 A. trichopoda v1.0
Defline:  (1 of 1) PTHR15629:SF2 - SH3 DOMAIN-CONTAINING YSC84-LIKE PROTEIN 1 Genomic Order:  2
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00106.2 Secondary Identifier:  ? PAC:31550158
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00106.2 0.5kb upstream 0.5kb upstream 3625 true AmTr_v1.0_scaffold00106: 8392-12016 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00106: 11517-12016 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 0.5kb downstream 0.5kb downstream 3625 true AmTr_v1.0_scaffold00106: 7892-11516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00106: 7892-8391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 1.0kb upstream 1.0kb upstream 4125 true AmTr_v1.0_scaffold00106: 8392-12516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00106: 11517-12516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 1.0kb downstream 1.0kb downstream 4125 true AmTr_v1.0_scaffold00106: 7392-11516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00106: 7392-8391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 2.0kb upstream 2.0kb upstream 5125 true AmTr_v1.0_scaffold00106: 8392-13516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00106: 11517-13516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 2.0kb downstream 2.0kb downstream 5125 true AmTr_v1.0_scaffold00106: 6392-11516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00106: 6392-8391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 5.0kb upstream 5.0kb upstream 8125 true AmTr_v1.0_scaffold00106: 8392-16516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00106: 11517-16516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 5.0kb downstream 5.0kb downstream 8125 true AmTr_v1.0_scaffold00106: 3392-11516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00106: 3392-8391 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 10.0kb upstream 10.0kb upstream 13125 true AmTr_v1.0_scaffold00106: 8392-21516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00106: 11517-21516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 10.0kb downstream 10.0kb downstream 11516 true AmTr_v1.0_scaffold00106: 1-11516 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.2 10.0kb downstream 10.0kb downstream 8391 false AmTr_v1.0_scaffold00106: 1-8391 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046278 5273 Angiosperm View MSA
121345874 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain