Gene : evm_27.TU.AmTr_v1.0_scaffold00104.32 A. trichopoda v1.0
Defline:  (1 of 1) PTHR22603:SF41 - CHOLINE KINASE 2-RELATED Genomic Order:  32
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00104.32 Secondary Identifier:  ? PAC:31553901
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-3385 Amborella trichopoda pathologic  
Atrichopoda PWY3O-450 Amborella trichopoda pathologic  
Atrichopoda PWY4FS-6 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00104.32 0.5kb upstream 0.5kb upstream 7087 true AmTr_v1.0_scaffold00104: 1037350-1044436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00104: 1037350-1037849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 0.5kb downstream 0.5kb downstream 7087 true AmTr_v1.0_scaffold00104: 1037850-1044936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00104: 1044437-1044936 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 1.0kb upstream 1.0kb upstream 7587 true AmTr_v1.0_scaffold00104: 1036850-1044436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00104: 1036850-1037849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 1.0kb downstream 1.0kb downstream 7587 true AmTr_v1.0_scaffold00104: 1037850-1045436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00104: 1044437-1045436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 2.0kb upstream 2.0kb upstream 8587 true AmTr_v1.0_scaffold00104: 1035850-1044436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00104: 1035850-1037849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 2.0kb downstream 2.0kb downstream 8587 true AmTr_v1.0_scaffold00104: 1037850-1046436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00104: 1044437-1046436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 5.0kb upstream 5.0kb upstream 11587 true AmTr_v1.0_scaffold00104: 1032850-1044436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00104: 1032850-1037849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 5.0kb downstream 5.0kb downstream 11587 true AmTr_v1.0_scaffold00104: 1037850-1049436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00104: 1044437-1049436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 10.0kb upstream 10.0kb upstream 16587 true AmTr_v1.0_scaffold00104: 1027850-1044436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00104: 1027850-1037849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 10.0kb downstream 10.0kb downstream 16587 true AmTr_v1.0_scaffold00104: 1037850-1054436 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.32 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00104: 1044437-1054436 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047896 5273 Angiosperm View MSA
121347088 5274 Embryophyte View MSA
123426626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain