Gene : evm_27.TU.AmTr_v1.0_scaffold00105.19 A. trichopoda v1.0
Defline:  (1 of 274) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  17
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00105.19 Secondary Identifier:  ? PAC:31562199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00105.19 0.5kb upstream 0.5kb upstream 2069 true AmTr_v1.0_scaffold00105: 395446-397514 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00105: 397015-397514 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 0.5kb downstream 0.5kb downstream 2069 true AmTr_v1.0_scaffold00105: 394946-397014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00105: 394946-395445 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 1.0kb upstream 1.0kb upstream 2569 true AmTr_v1.0_scaffold00105: 395446-398014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00105: 397015-398014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 1.0kb downstream 1.0kb downstream 2569 true AmTr_v1.0_scaffold00105: 394446-397014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00105: 394446-395445 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 2.0kb upstream 2.0kb upstream 3569 true AmTr_v1.0_scaffold00105: 395446-399014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00105: 397015-399014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 2.0kb downstream 2.0kb downstream 3569 true AmTr_v1.0_scaffold00105: 393446-397014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00105: 393446-395445 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 5.0kb upstream 5.0kb upstream 6569 true AmTr_v1.0_scaffold00105: 395446-402014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00105: 397015-402014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 5.0kb downstream 5.0kb downstream 6569 true AmTr_v1.0_scaffold00105: 390446-397014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00105: 390446-395445 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 10.0kb upstream 10.0kb upstream 11569 true AmTr_v1.0_scaffold00105: 395446-407014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00105: 397015-407014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 10.0kb downstream 10.0kb downstream 11569 true AmTr_v1.0_scaffold00105: 385446-397014 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00105.19 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00105: 385446-395445 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain