Gene : evm_27.TU.AmTr_v1.0_scaffold00104.56 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12169:SF5 - AFG1-LIKE ATPASE FAMILY PROTEIN Genomic Order:  55
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00104.56 Secondary Identifier:  ? PAC:31553907
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00104.56 0.5kb upstream 0.5kb upstream 42446 true AmTr_v1.0_scaffold00104: 1714249-1756694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00104: 1714249-1714748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 0.5kb downstream 0.5kb downstream 42446 true AmTr_v1.0_scaffold00104: 1714749-1757194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00104: 1756695-1757194 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 1.0kb upstream 1.0kb upstream 42946 true AmTr_v1.0_scaffold00104: 1713749-1756694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00104: 1713749-1714748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 1.0kb downstream 1.0kb downstream 42946 true AmTr_v1.0_scaffold00104: 1714749-1757694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00104: 1756695-1757694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 2.0kb upstream 2.0kb upstream 43946 true AmTr_v1.0_scaffold00104: 1712749-1756694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00104: 1712749-1714748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 2.0kb downstream 2.0kb downstream 43946 true AmTr_v1.0_scaffold00104: 1714749-1758694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00104: 1756695-1758694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 5.0kb upstream 5.0kb upstream 46946 true AmTr_v1.0_scaffold00104: 1709749-1756694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00104: 1709749-1714748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 5.0kb downstream 5.0kb downstream 46946 true AmTr_v1.0_scaffold00104: 1714749-1761694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00104: 1756695-1761694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 10.0kb upstream 10.0kb upstream 51946 true AmTr_v1.0_scaffold00104: 1704749-1756694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00104: 1704749-1714748 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 10.0kb downstream 10.0kb downstream 51946 true AmTr_v1.0_scaffold00104: 1714749-1766694 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00104.56 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00104: 1756695-1766694 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048281 5273 Angiosperm View MSA
121348170 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain