Gene : evm_27.TU.AmTr_v1.0_scaffold00103.17 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12725//PTHR12725:SF81 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  17
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00103.17 Secondary Identifier:  ? PAC:31567099
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7204 Amborella trichopoda pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00103.17 0.5kb upstream 0.5kb upstream 4292 true AmTr_v1.0_scaffold00103: 327558-331849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00103: 327558-328057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 0.5kb downstream 0.5kb downstream 4292 true AmTr_v1.0_scaffold00103: 328058-332349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00103: 331850-332349 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 1.0kb upstream 1.0kb upstream 4792 true AmTr_v1.0_scaffold00103: 327058-331849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00103: 327058-328057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 1.0kb downstream 1.0kb downstream 4792 true AmTr_v1.0_scaffold00103: 328058-332849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00103: 331850-332849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 2.0kb upstream 2.0kb upstream 5792 true AmTr_v1.0_scaffold00103: 326058-331849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00103: 326058-328057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 2.0kb downstream 2.0kb downstream 5792 true AmTr_v1.0_scaffold00103: 328058-333849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00103: 331850-333849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 5.0kb upstream 5.0kb upstream 8792 true AmTr_v1.0_scaffold00103: 323058-331849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00103: 323058-328057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 5.0kb downstream 5.0kb downstream 8792 true AmTr_v1.0_scaffold00103: 328058-336849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00103: 331850-336849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 10.0kb upstream 10.0kb upstream 13792 true AmTr_v1.0_scaffold00103: 318058-331849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00103: 318058-328057 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 10.0kb downstream 10.0kb downstream 13792 true AmTr_v1.0_scaffold00103: 328058-341849 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00103.17 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00103: 331850-341849 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048898 5273 Angiosperm View MSA
121311158 5274 Embryophyte View MSA
123426890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain