Gene : evm_27.TU.AmTr_v1.0_scaffold00101.59 A. trichopoda v1.0
Defline:  (1 of 1) PTHR15131 - SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1 Genomic Order:  58
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00101.59 Secondary Identifier:  ? PAC:31558401
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00101.59 0.5kb upstream 0.5kb upstream 5518 true AmTr_v1.0_scaffold00101: 913628-919145 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00101: 918646-919145 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 0.5kb downstream 0.5kb downstream 5518 true AmTr_v1.0_scaffold00101: 913128-918645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00101: 913128-913627 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 1.0kb upstream 1.0kb upstream 6018 true AmTr_v1.0_scaffold00101: 913628-919645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00101: 918646-919645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 1.0kb downstream 1.0kb downstream 6018 true AmTr_v1.0_scaffold00101: 912628-918645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00101: 912628-913627 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 2.0kb upstream 2.0kb upstream 7018 true AmTr_v1.0_scaffold00101: 913628-920645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00101: 918646-920645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 2.0kb downstream 2.0kb downstream 7018 true AmTr_v1.0_scaffold00101: 911628-918645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00101: 911628-913627 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 5.0kb upstream 5.0kb upstream 10018 true AmTr_v1.0_scaffold00101: 913628-923645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00101: 918646-923645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 5.0kb downstream 5.0kb downstream 10018 true AmTr_v1.0_scaffold00101: 908628-918645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00101: 908628-913627 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 10.0kb upstream 10.0kb upstream 15018 true AmTr_v1.0_scaffold00101: 913628-928645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00101: 918646-928645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 10.0kb downstream 10.0kb downstream 15018 true AmTr_v1.0_scaffold00101: 903628-918645 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.59 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00101: 903628-913627 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043179 5273 Angiosperm View MSA
121344742 5274 Embryophyte View MSA
123426038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain