Gene : evm_27.TU.AmTr_v1.0_scaffold00101.78 A. trichopoda v1.0
Defline:  (1 of 2) PTHR10252//PTHR10252:SF40 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Genomic Order:  77
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00101.78 Secondary Identifier:  ? PAC:31558319
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00101.78 0.5kb upstream 0.5kb upstream 13156 true AmTr_v1.0_scaffold00101: 1228239-1241394 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00101: 1240895-1241394 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 0.5kb downstream 0.5kb downstream 13156 true AmTr_v1.0_scaffold00101: 1227739-1240894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00101: 1227739-1228238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 1.0kb upstream 1.0kb upstream 13656 true AmTr_v1.0_scaffold00101: 1228239-1241894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00101: 1240895-1241894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 1.0kb downstream 1.0kb downstream 13656 true AmTr_v1.0_scaffold00101: 1227239-1240894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00101: 1227239-1228238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 2.0kb upstream 2.0kb upstream 14656 true AmTr_v1.0_scaffold00101: 1228239-1242894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00101: 1240895-1242894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 2.0kb downstream 2.0kb downstream 14656 true AmTr_v1.0_scaffold00101: 1226239-1240894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00101: 1226239-1228238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 5.0kb upstream 5.0kb upstream 17656 true AmTr_v1.0_scaffold00101: 1228239-1245894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00101: 1240895-1245894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 5.0kb downstream 5.0kb downstream 17656 true AmTr_v1.0_scaffold00101: 1223239-1240894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00101: 1223239-1228238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 10.0kb upstream 10.0kb upstream 22656 true AmTr_v1.0_scaffold00101: 1228239-1250894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00101: 1240895-1250894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 10.0kb downstream 10.0kb downstream 22656 true AmTr_v1.0_scaffold00101: 1218239-1240894 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00101.78 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00101: 1218239-1228238 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049084 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121345521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain