Gene : evm_27.TU.AmTr_v1.0_scaffold00110.55 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11468:SF8 - ALPHA-GLUCAN PHOSPHORYLASE 1 Genomic Order:  54
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00110.55 Secondary Identifier:  ? PAC:31552756
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-7238 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00110.55 0.5kb upstream 0.5kb upstream 11686 true AmTr_v1.0_scaffold00110: 1117126-1128811 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00110: 1128312-1128811 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 0.5kb downstream 0.5kb downstream 11686 true AmTr_v1.0_scaffold00110: 1116626-1128311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00110: 1116626-1117125 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 1.0kb upstream 1.0kb upstream 12186 true AmTr_v1.0_scaffold00110: 1117126-1129311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00110: 1128312-1129311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 1.0kb downstream 1.0kb downstream 12186 true AmTr_v1.0_scaffold00110: 1116126-1128311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00110: 1116126-1117125 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 2.0kb upstream 2.0kb upstream 13186 true AmTr_v1.0_scaffold00110: 1117126-1130311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00110: 1128312-1130311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 2.0kb downstream 2.0kb downstream 13186 true AmTr_v1.0_scaffold00110: 1115126-1128311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00110: 1115126-1117125 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 5.0kb upstream 5.0kb upstream 16186 true AmTr_v1.0_scaffold00110: 1117126-1133311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00110: 1128312-1133311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 5.0kb downstream 5.0kb downstream 16186 true AmTr_v1.0_scaffold00110: 1112126-1128311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00110: 1112126-1117125 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 10.0kb upstream 10.0kb upstream 21186 true AmTr_v1.0_scaffold00110: 1117126-1138311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00110: 1128312-1138311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 10.0kb downstream 10.0kb downstream 21186 true AmTr_v1.0_scaffold00110: 1107126-1128311 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.55 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00110: 1107126-1117125 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain