Gene : evm_27.TU.AmTr_v1.0_scaffold00111.20 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12866:SF2 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 Genomic Order:  19
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00111.20 Secondary Identifier:  ? PAC:31573591
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00111.20 0.5kb upstream 0.5kb upstream 12689 true AmTr_v1.0_scaffold00111: 329584-342272 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00111: 341773-342272 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 0.5kb downstream 0.5kb downstream 12689 true AmTr_v1.0_scaffold00111: 329084-341772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00111: 329084-329583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 1.0kb upstream 1.0kb upstream 13189 true AmTr_v1.0_scaffold00111: 329584-342772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00111: 341773-342772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 1.0kb downstream 1.0kb downstream 13189 true AmTr_v1.0_scaffold00111: 328584-341772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00111: 328584-329583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 2.0kb upstream 2.0kb upstream 14189 true AmTr_v1.0_scaffold00111: 329584-343772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00111: 341773-343772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 2.0kb downstream 2.0kb downstream 14189 true AmTr_v1.0_scaffold00111: 327584-341772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00111: 327584-329583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 5.0kb upstream 5.0kb upstream 17189 true AmTr_v1.0_scaffold00111: 329584-346772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00111: 341773-346772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 5.0kb downstream 5.0kb downstream 17189 true AmTr_v1.0_scaffold00111: 324584-341772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00111: 324584-329583 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 10.0kb upstream 10.0kb upstream 22189 true AmTr_v1.0_scaffold00111: 329584-351772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00111: 341773-351772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 10.0kb downstream 10.0kb downstream 22189 true AmTr_v1.0_scaffold00111: 319584-341772 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.20 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00111: 319584-329583 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041877 5273 Angiosperm View MSA
121349462 5274 Embryophyte View MSA
123426307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain