Gene : evm_27.TU.AmTr_v1.0_scaffold00111.16 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE Genomic Order:  15
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00111.16 Secondary Identifier:  ? PAC:31573633
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00111.16 0.5kb upstream 0.5kb upstream 3598 true AmTr_v1.0_scaffold00111: 242191-245788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00111: 245289-245788 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 0.5kb downstream 0.5kb downstream 3598 true AmTr_v1.0_scaffold00111: 241691-245288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00111: 241691-242190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 1.0kb upstream 1.0kb upstream 4098 true AmTr_v1.0_scaffold00111: 242191-246288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00111: 245289-246288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 1.0kb downstream 1.0kb downstream 4098 true AmTr_v1.0_scaffold00111: 241191-245288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00111: 241191-242190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 2.0kb upstream 2.0kb upstream 5098 true AmTr_v1.0_scaffold00111: 242191-247288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00111: 245289-247288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 2.0kb downstream 2.0kb downstream 5098 true AmTr_v1.0_scaffold00111: 240191-245288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00111: 240191-242190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 5.0kb upstream 5.0kb upstream 8098 true AmTr_v1.0_scaffold00111: 242191-250288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00111: 245289-250288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 5.0kb downstream 5.0kb downstream 8098 true AmTr_v1.0_scaffold00111: 237191-245288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00111: 237191-242190 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 10.0kb upstream 10.0kb upstream 13098 true AmTr_v1.0_scaffold00111: 242191-255288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00111: 245289-255288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 10.0kb downstream 10.0kb downstream 13098 true AmTr_v1.0_scaffold00111: 232191-245288 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.16 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00111: 232191-242190 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045794 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain