Gene : evm_27.TU.AmTr_v1.0_scaffold00109.87 A. trichopoda v1.0
Defline:  (1 of 2) PF06592 - Protein of unknown function (DUF1138) (DUF1138) Genomic Order:  87
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00109.87 Secondary Identifier:  ? PAC:31570640
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00109.87 0.5kb upstream 0.5kb upstream 3081 true AmTr_v1.0_scaffold00109: 1194963-1198043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00109: 1194963-1195462 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 0.5kb downstream 0.5kb downstream 3081 true AmTr_v1.0_scaffold00109: 1195463-1198543 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00109: 1198044-1198543 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 1.0kb upstream 1.0kb upstream 3581 true AmTr_v1.0_scaffold00109: 1194463-1198043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00109: 1194463-1195462 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 1.0kb downstream 1.0kb downstream 3581 true AmTr_v1.0_scaffold00109: 1195463-1199043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00109: 1198044-1199043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 2.0kb upstream 2.0kb upstream 4581 true AmTr_v1.0_scaffold00109: 1193463-1198043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00109: 1193463-1195462 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 2.0kb downstream 2.0kb downstream 4581 true AmTr_v1.0_scaffold00109: 1195463-1200043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00109: 1198044-1200043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 5.0kb upstream 5.0kb upstream 7581 true AmTr_v1.0_scaffold00109: 1190463-1198043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00109: 1190463-1195462 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 5.0kb downstream 5.0kb downstream 7581 true AmTr_v1.0_scaffold00109: 1195463-1203043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00109: 1198044-1203043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 10.0kb upstream 10.0kb upstream 12581 true AmTr_v1.0_scaffold00109: 1185463-1198043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00109: 1185463-1195462 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 10.0kb downstream 10.0kb downstream 12581 true AmTr_v1.0_scaffold00109: 1195463-1208043 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.87 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00109: 1198044-1208043 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122051261 5273 Angiosperm View MSA
121351565 5274 Embryophyte View MSA
123382229 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain