Gene : evm_27.TU.AmTr_v1.0_scaffold00110.128 A. trichopoda v1.0
Defline:  (1 of 1) PF11817//PF12584 - Foie gras liver health family 1 (Foie-gras_1) // Trafficking protein particle complex subunit 10, TRAPPC10 (TRAPPC10) Genomic Order:  125
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00110.128 Secondary Identifier:  ? PAC:31552777
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00110.128 0.5kb upstream 0.5kb upstream 54129 true AmTr_v1.0_scaffold00110: 2276330-2330458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00110: 2276330-2276829 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 0.5kb downstream 0.5kb downstream 54129 true AmTr_v1.0_scaffold00110: 2276830-2330958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00110: 2330459-2330958 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 1.0kb upstream 1.0kb upstream 54629 true AmTr_v1.0_scaffold00110: 2275830-2330458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00110: 2275830-2276829 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 1.0kb downstream 1.0kb downstream 54629 true AmTr_v1.0_scaffold00110: 2276830-2331458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00110: 2330459-2331458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 2.0kb upstream 2.0kb upstream 55629 true AmTr_v1.0_scaffold00110: 2274830-2330458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00110: 2274830-2276829 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 2.0kb downstream 2.0kb downstream 55629 true AmTr_v1.0_scaffold00110: 2276830-2332458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00110: 2330459-2332458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 5.0kb upstream 5.0kb upstream 58629 true AmTr_v1.0_scaffold00110: 2271830-2330458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00110: 2271830-2276829 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 5.0kb downstream 5.0kb downstream 58629 true AmTr_v1.0_scaffold00110: 2276830-2335458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00110: 2330459-2335458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 10.0kb upstream 10.0kb upstream 63629 true AmTr_v1.0_scaffold00110: 2266830-2330458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00110: 2266830-2276829 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 10.0kb downstream 10.0kb downstream 63629 true AmTr_v1.0_scaffold00110: 2276830-2340458 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00110.128 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00110: 2330459-2340458 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046287 5273 Angiosperm View MSA
121348694 5274 Embryophyte View MSA
123380976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain