Gene : evm_27.TU.AmTr_v1.0_scaffold00109.126 A. trichopoda v1.0
Defline:  (1 of 1) KOG2916 - Translation initiation factor 2, alpha subunit (eIF-2alpha) Genomic Order:  126
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00109.126 Secondary Identifier:  ? PAC:31570530
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00109.126 0.5kb upstream 0.5kb upstream 12711 true AmTr_v1.0_scaffold00109: 1682987-1695697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00109: 1682987-1683486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 0.5kb downstream 0.5kb downstream 12711 true AmTr_v1.0_scaffold00109: 1683487-1696197 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00109: 1695698-1696197 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 1.0kb upstream 1.0kb upstream 13211 true AmTr_v1.0_scaffold00109: 1682487-1695697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00109: 1682487-1683486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 1.0kb downstream 1.0kb downstream 13211 true AmTr_v1.0_scaffold00109: 1683487-1696697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00109: 1695698-1696697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 2.0kb upstream 2.0kb upstream 14211 true AmTr_v1.0_scaffold00109: 1681487-1695697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00109: 1681487-1683486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 2.0kb downstream 2.0kb downstream 14211 true AmTr_v1.0_scaffold00109: 1683487-1697697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00109: 1695698-1697697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 5.0kb upstream 5.0kb upstream 17211 true AmTr_v1.0_scaffold00109: 1678487-1695697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00109: 1678487-1683486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 5.0kb downstream 5.0kb downstream 17211 true AmTr_v1.0_scaffold00109: 1683487-1700697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00109: 1695698-1700697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 10.0kb upstream 10.0kb upstream 22211 true AmTr_v1.0_scaffold00109: 1673487-1695697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00109: 1673487-1683486 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 10.0kb downstream 10.0kb downstream 22211 true AmTr_v1.0_scaffold00109: 1683487-1705697 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00109.126 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00109: 1695698-1705697 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043583 5273 Angiosperm View MSA
121345071 5274 Embryophyte View MSA
123424758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain