Gene : evm_27.TU.AmTr_v1.0_scaffold00107.25 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10536 - DNA PRIMASE SMALL SUBUNIT Genomic Order:  25
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00107.25 Secondary Identifier:  ? PAC:31572402
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00107.25 0.5kb upstream 0.5kb upstream 10368 true AmTr_v1.0_scaffold00107: 1099728-1110095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00107: 1099728-1100227 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 0.5kb downstream 0.5kb downstream 10368 true AmTr_v1.0_scaffold00107: 1100228-1110595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00107: 1110096-1110595 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 1.0kb upstream 1.0kb upstream 10868 true AmTr_v1.0_scaffold00107: 1099228-1110095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00107: 1099228-1100227 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 1.0kb downstream 1.0kb downstream 10868 true AmTr_v1.0_scaffold00107: 1100228-1111095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00107: 1110096-1111095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 2.0kb upstream 2.0kb upstream 11868 true AmTr_v1.0_scaffold00107: 1098228-1110095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00107: 1098228-1100227 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 2.0kb downstream 2.0kb downstream 11868 true AmTr_v1.0_scaffold00107: 1100228-1112095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00107: 1110096-1112095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 5.0kb upstream 5.0kb upstream 14868 true AmTr_v1.0_scaffold00107: 1095228-1110095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00107: 1095228-1100227 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 5.0kb downstream 5.0kb downstream 14868 true AmTr_v1.0_scaffold00107: 1100228-1115095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00107: 1110096-1115095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 10.0kb upstream 10.0kb upstream 19868 true AmTr_v1.0_scaffold00107: 1090228-1110095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00107: 1090228-1100227 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 10.0kb downstream 10.0kb downstream 19868 true AmTr_v1.0_scaffold00107: 1100228-1120095 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.25 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00107: 1110096-1120095 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122044142 5273 Angiosperm View MSA
121345966 5274 Embryophyte View MSA
123424761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain