Gene : evm_27.TU.AmTr_v1.0_scaffold00107.18 A. trichopoda v1.0
Defline:  (1 of 1) PTHR11225 - NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN Genomic Order:  18
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00107.18 Secondary Identifier:  ? PAC:31572411
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00107.18 0.5kb upstream 0.5kb upstream 47878 true AmTr_v1.0_scaffold00107: 430444-478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00107: 430444-430943 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 0.5kb downstream 0.5kb downstream 47878 true AmTr_v1.0_scaffold00107: 430944-478821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00107: 478322-478821 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 1.0kb upstream 1.0kb upstream 48378 true AmTr_v1.0_scaffold00107: 429944-478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00107: 429944-430943 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 1.0kb downstream 1.0kb downstream 48378 true AmTr_v1.0_scaffold00107: 430944-479321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00107: 478322-479321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 2.0kb upstream 2.0kb upstream 49378 true AmTr_v1.0_scaffold00107: 428944-478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00107: 428944-430943 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 2.0kb downstream 2.0kb downstream 49378 true AmTr_v1.0_scaffold00107: 430944-480321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00107: 478322-480321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 5.0kb upstream 5.0kb upstream 52378 true AmTr_v1.0_scaffold00107: 425944-478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00107: 425944-430943 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 5.0kb downstream 5.0kb downstream 52378 true AmTr_v1.0_scaffold00107: 430944-483321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00107: 478322-483321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 10.0kb upstream 10.0kb upstream 57378 true AmTr_v1.0_scaffold00107: 420944-478321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00107: 420944-430943 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 10.0kb downstream 10.0kb downstream 57378 true AmTr_v1.0_scaffold00107: 430944-488321 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.18 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00107: 478322-488321 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043795 5273 Angiosperm View MSA
121346539 5274 Embryophyte View MSA
123424897 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain