Gene : evm_27.TU.AmTr_v1.0_scaffold00107.14 A. trichopoda v1.0
Defline:  (1 of 1) PTHR23105:SF5 - 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL Genomic Order:  14
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00107.14 Secondary Identifier:  ? PAC:31572444
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0 Pathways

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00107.14 0.5kb upstream 0.5kb upstream 23965 true AmTr_v1.0_scaffold00107: 275349-299313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00107: 298814-299313 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 0.5kb downstream 0.5kb downstream 23965 true AmTr_v1.0_scaffold00107: 274849-298813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00107: 274849-275348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 1.0kb upstream 1.0kb upstream 24465 true AmTr_v1.0_scaffold00107: 275349-299813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00107: 298814-299813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 1.0kb downstream 1.0kb downstream 24465 true AmTr_v1.0_scaffold00107: 274349-298813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00107: 274349-275348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 2.0kb upstream 2.0kb upstream 25465 true AmTr_v1.0_scaffold00107: 275349-300813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00107: 298814-300813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 2.0kb downstream 2.0kb downstream 25465 true AmTr_v1.0_scaffold00107: 273349-298813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00107: 273349-275348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 5.0kb upstream 5.0kb upstream 28465 true AmTr_v1.0_scaffold00107: 275349-303813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00107: 298814-303813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 5.0kb downstream 5.0kb downstream 28465 true AmTr_v1.0_scaffold00107: 270349-298813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00107: 270349-275348 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 10.0kb upstream 10.0kb upstream 33465 true AmTr_v1.0_scaffold00107: 275349-308813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00107: 298814-308813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 10.0kb downstream 10.0kb downstream 33465 true AmTr_v1.0_scaffold00107: 265349-298813 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00107.14 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00107: 265349-275348 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain