Gene : evm_27.TU.AmTr_v1.0_scaffold00106.78 A. trichopoda v1.0
Defline:  (1 of 2) PTHR12858:SF2 - RIBOSOME BIOGENESIS PROTEIN BMS1 HOMOLOG Genomic Order:  77
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00106.78 Secondary Identifier:  ? PAC:31550281
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00106.78 0.5kb upstream 0.5kb upstream 8355 true AmTr_v1.0_scaffold00106: 1333161-1341515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00106: 1341016-1341515 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 0.5kb downstream 0.5kb downstream 8355 true AmTr_v1.0_scaffold00106: 1332661-1341015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00106: 1332661-1333160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 1.0kb upstream 1.0kb upstream 8855 true AmTr_v1.0_scaffold00106: 1333161-1342015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00106: 1341016-1342015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 1.0kb downstream 1.0kb downstream 8855 true AmTr_v1.0_scaffold00106: 1332161-1341015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00106: 1332161-1333160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 2.0kb upstream 2.0kb upstream 9855 true AmTr_v1.0_scaffold00106: 1333161-1343015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00106: 1341016-1343015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 2.0kb downstream 2.0kb downstream 9855 true AmTr_v1.0_scaffold00106: 1331161-1341015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00106: 1331161-1333160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 5.0kb upstream 5.0kb upstream 12855 true AmTr_v1.0_scaffold00106: 1333161-1346015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00106: 1341016-1346015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 5.0kb downstream 5.0kb downstream 12855 true AmTr_v1.0_scaffold00106: 1328161-1341015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00106: 1328161-1333160 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 10.0kb upstream 10.0kb upstream 17855 true AmTr_v1.0_scaffold00106: 1333161-1351015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00106: 1341016-1351015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 10.0kb downstream 10.0kb downstream 17855 true AmTr_v1.0_scaffold00106: 1323161-1341015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00106.78 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00106: 1323161-1333160 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain