Gene : evm_27.TU.AmTr_v1.0_scaffold00119.101 A. trichopoda v1.0
Defline:  (1 of 1) PTHR21499:SF33 - HOMOSERINE DEHYDROGENASE Genomic Order:  100
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00119.101 Secondary Identifier:  ? PAC:31559483
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda HOMOSERSYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-3001 Amborella trichopoda pathologic  
Atrichopoda PWY-724 Amborella trichopoda pathologic  
Atrichopoda THRESYN-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00119.101 0.5kb upstream 0.5kb upstream 11110 true AmTr_v1.0_scaffold00119: 1745896-1757005 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00119: 1756506-1757005 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 0.5kb downstream 0.5kb downstream 11110 true AmTr_v1.0_scaffold00119: 1745396-1756505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00119: 1745396-1745895 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 1.0kb upstream 1.0kb upstream 11610 true AmTr_v1.0_scaffold00119: 1745896-1757505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00119: 1756506-1757505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 1.0kb downstream 1.0kb downstream 11610 true AmTr_v1.0_scaffold00119: 1744896-1756505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00119: 1744896-1745895 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 2.0kb upstream 2.0kb upstream 12610 true AmTr_v1.0_scaffold00119: 1745896-1758505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00119: 1756506-1758505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 2.0kb downstream 2.0kb downstream 12610 true AmTr_v1.0_scaffold00119: 1743896-1756505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00119: 1743896-1745895 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 5.0kb upstream 5.0kb upstream 15610 true AmTr_v1.0_scaffold00119: 1745896-1761505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00119: 1756506-1761505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 5.0kb downstream 5.0kb downstream 15610 true AmTr_v1.0_scaffold00119: 1740896-1756505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00119: 1740896-1745895 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 10.0kb upstream 10.0kb upstream 20610 true AmTr_v1.0_scaffold00119: 1745896-1766505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00119: 1756506-1766505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 10.0kb downstream 10.0kb downstream 20610 true AmTr_v1.0_scaffold00119: 1735896-1756505 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.101 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00119: 1735896-1745895 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain