Gene : evm_27.TU.AmTr_v1.0_scaffold00119.50 A. trichopoda v1.0
Defline:  (1 of 1) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Genomic Order:  50
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00119.50 Secondary Identifier:  ? PAC:31559490
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda CYSTSYN-PWY Amborella trichopoda pathologic  
Atrichopoda PWY-6936 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00119.50 0.5kb upstream 0.5kb upstream 11526 true AmTr_v1.0_scaffold00119: 750589-762114 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00119: 761615-762114 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 0.5kb downstream 0.5kb downstream 11526 true AmTr_v1.0_scaffold00119: 750089-761614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00119: 750089-750588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 1.0kb upstream 1.0kb upstream 12026 true AmTr_v1.0_scaffold00119: 750589-762614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00119: 761615-762614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 1.0kb downstream 1.0kb downstream 12026 true AmTr_v1.0_scaffold00119: 749589-761614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00119: 749589-750588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 2.0kb upstream 2.0kb upstream 13026 true AmTr_v1.0_scaffold00119: 750589-763614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00119: 761615-763614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 2.0kb downstream 2.0kb downstream 13026 true AmTr_v1.0_scaffold00119: 748589-761614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00119: 748589-750588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 5.0kb upstream 5.0kb upstream 16026 true AmTr_v1.0_scaffold00119: 750589-766614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00119: 761615-766614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 5.0kb downstream 5.0kb downstream 16026 true AmTr_v1.0_scaffold00119: 745589-761614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00119: 745589-750588 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 10.0kb upstream 10.0kb upstream 21026 true AmTr_v1.0_scaffold00119: 750589-771614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00119: 761615-771614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 10.0kb downstream 10.0kb downstream 21026 true AmTr_v1.0_scaffold00119: 740589-761614 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00119.50 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00119: 740589-750588 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain