Gene : evm_27.TU.AmTr_v1.0_scaffold00111.47 A. trichopoda v1.0
Defline:  (1 of 1) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  46
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00111.47 Secondary Identifier:  ? PAC:31573655
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-5129 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00111.47 0.5kb upstream 0.5kb upstream 7340 true AmTr_v1.0_scaffold00111: 808980-816319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00111: 808980-809479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 0.5kb downstream 0.5kb downstream 7340 true AmTr_v1.0_scaffold00111: 809480-816819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00111: 816320-816819 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 1.0kb upstream 1.0kb upstream 7840 true AmTr_v1.0_scaffold00111: 808480-816319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00111: 808480-809479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 1.0kb downstream 1.0kb downstream 7840 true AmTr_v1.0_scaffold00111: 809480-817319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00111: 816320-817319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 2.0kb upstream 2.0kb upstream 8840 true AmTr_v1.0_scaffold00111: 807480-816319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00111: 807480-809479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 2.0kb downstream 2.0kb downstream 8840 true AmTr_v1.0_scaffold00111: 809480-818319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00111: 816320-818319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 5.0kb upstream 5.0kb upstream 11840 true AmTr_v1.0_scaffold00111: 804480-816319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00111: 804480-809479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 5.0kb downstream 5.0kb downstream 11840 true AmTr_v1.0_scaffold00111: 809480-821319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00111: 816320-821319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 10.0kb upstream 10.0kb upstream 16840 true AmTr_v1.0_scaffold00111: 799480-816319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00111: 799480-809479 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 10.0kb downstream 10.0kb downstream 16840 true AmTr_v1.0_scaffold00111: 809480-826319 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00111.47 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00111: 816320-826319 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain