Gene : evm_27.TU.AmTr_v1.0_scaffold00131.27 A. trichopoda v1.0
Defline:  (1 of 1) PTHR12668:SF5 - UPF0136 MEMBRANE PROTEIN YJR085C Genomic Order:  27
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00131.27 Secondary Identifier:  ? PAC:31567850
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00131.27 0.5kb upstream 0.5kb upstream 2716 true AmTr_v1.0_scaffold00131: 417872-420587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00131: 417872-418371 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 0.5kb downstream 0.5kb downstream 2716 true AmTr_v1.0_scaffold00131: 418372-421087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00131: 420588-421087 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 1.0kb upstream 1.0kb upstream 3216 true AmTr_v1.0_scaffold00131: 417372-420587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00131: 417372-418371 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 1.0kb downstream 1.0kb downstream 3216 true AmTr_v1.0_scaffold00131: 418372-421587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00131: 420588-421587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 2.0kb upstream 2.0kb upstream 4216 true AmTr_v1.0_scaffold00131: 416372-420587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00131: 416372-418371 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 2.0kb downstream 2.0kb downstream 4216 true AmTr_v1.0_scaffold00131: 418372-422587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00131: 420588-422587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 5.0kb upstream 5.0kb upstream 7216 true AmTr_v1.0_scaffold00131: 413372-420587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00131: 413372-418371 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 5.0kb downstream 5.0kb downstream 7216 true AmTr_v1.0_scaffold00131: 418372-425587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00131: 420588-425587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 10.0kb upstream 10.0kb upstream 12216 true AmTr_v1.0_scaffold00131: 408372-420587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00131: 408372-418371 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 10.0kb downstream 10.0kb downstream 12216 true AmTr_v1.0_scaffold00131: 418372-430587 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00131.27 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00131: 420588-430587 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047216 5273 Angiosperm View MSA
121351322 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain