Gene : evm_27.TU.AmTr_v1.0_scaffold00133.17 A. trichopoda v1.0
Defline:  (1 of 1) 1.1.5.2 - Quinoprotein glucose dehydrogenase (PQQ, quinone) / Quinoprotein D-glucose dehydrogenase Genomic Order:  17
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00133.17 Secondary Identifier:  ? PAC:31565021
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda GLUCOSE1PMETAB-PWY Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00133.17 0.5kb upstream 0.5kb upstream 24582 true AmTr_v1.0_scaffold00133: 497657-522238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00133: 497657-498156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 0.5kb downstream 0.5kb downstream 24582 true AmTr_v1.0_scaffold00133: 498157-522738 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00133: 522239-522738 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 1.0kb upstream 1.0kb upstream 25082 true AmTr_v1.0_scaffold00133: 497157-522238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00133: 497157-498156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 1.0kb downstream 1.0kb downstream 25082 true AmTr_v1.0_scaffold00133: 498157-523238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00133: 522239-523238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 2.0kb upstream 2.0kb upstream 26082 true AmTr_v1.0_scaffold00133: 496157-522238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00133: 496157-498156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 2.0kb downstream 2.0kb downstream 26082 true AmTr_v1.0_scaffold00133: 498157-524238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00133: 522239-524238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 5.0kb upstream 5.0kb upstream 29082 true AmTr_v1.0_scaffold00133: 493157-522238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00133: 493157-498156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 5.0kb downstream 5.0kb downstream 29082 true AmTr_v1.0_scaffold00133: 498157-527238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00133: 522239-527238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 10.0kb upstream 10.0kb upstream 34082 true AmTr_v1.0_scaffold00133: 488157-522238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00133: 488157-498156 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 10.0kb downstream 10.0kb downstream 34082 true AmTr_v1.0_scaffold00133: 498157-532238 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00133.17 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00133: 522239-532238 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045052 5273 Angiosperm View MSA
121344764 5274 Embryophyte View MSA
123380098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain