Gene : evm_27.TU.AmTr_v1.0_scaffold00130.1 A. trichopoda v1.0
Defline:  (1 of 5) PTHR33270:SF5 - GB Genomic Order:  1
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00130.1 Secondary Identifier:  ? PAC:31553319
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00130.1 0.5kb upstream 0.5kb upstream 1082 true AmTr_v1.0_scaffold00130: 33346-34427 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00130: 33928-34427 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 0.5kb downstream 0.5kb downstream 1082 true AmTr_v1.0_scaffold00130: 32846-33927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00130: 32846-33345 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 1.0kb upstream 1.0kb upstream 1582 true AmTr_v1.0_scaffold00130: 33346-34927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00130: 33928-34927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 1.0kb downstream 1.0kb downstream 1582 true AmTr_v1.0_scaffold00130: 32346-33927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00130: 32346-33345 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 2.0kb upstream 2.0kb upstream 2582 true AmTr_v1.0_scaffold00130: 33346-35927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00130: 33928-35927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 2.0kb downstream 2.0kb downstream 2582 true AmTr_v1.0_scaffold00130: 31346-33927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00130: 31346-33345 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 5.0kb upstream 5.0kb upstream 5582 true AmTr_v1.0_scaffold00130: 33346-38927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00130: 33928-38927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 5.0kb downstream 5.0kb downstream 5582 true AmTr_v1.0_scaffold00130: 28346-33927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00130: 28346-33345 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 10.0kb upstream 10.0kb upstream 10582 true AmTr_v1.0_scaffold00130: 33346-43927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00130: 33928-43927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 10.0kb downstream 10.0kb downstream 10582 true AmTr_v1.0_scaffold00130: 23346-33927 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00130.1 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00130: 23346-33345 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049795 5273 Angiosperm View MSA
121311591 5274 Embryophyte View MSA
123348867 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain