Gene : evm_27.TU.AmTr_v1.0_scaffold00129.65 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11353//PTHR11353:SF93 - CHAPERONIN Genomic Order:  61
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00129.65 Secondary Identifier:  ? PAC:31551601
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-6352 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00129.65 0.5kb upstream 0.5kb upstream 14907 true AmTr_v1.0_scaffold00129: 1080800-1095706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00129: 1095207-1095706 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 0.5kb downstream 0.5kb downstream 14907 true AmTr_v1.0_scaffold00129: 1080300-1095206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00129: 1080300-1080799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 1.0kb upstream 1.0kb upstream 15407 true AmTr_v1.0_scaffold00129: 1080800-1096206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00129: 1095207-1096206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 1.0kb downstream 1.0kb downstream 15407 true AmTr_v1.0_scaffold00129: 1079800-1095206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00129: 1079800-1080799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 2.0kb upstream 2.0kb upstream 16407 true AmTr_v1.0_scaffold00129: 1080800-1097206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00129: 1095207-1097206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 2.0kb downstream 2.0kb downstream 16407 true AmTr_v1.0_scaffold00129: 1078800-1095206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00129: 1078800-1080799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 5.0kb upstream 5.0kb upstream 19407 true AmTr_v1.0_scaffold00129: 1080800-1100206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00129: 1095207-1100206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 5.0kb downstream 5.0kb downstream 19407 true AmTr_v1.0_scaffold00129: 1075800-1095206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00129: 1075800-1080799 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 10.0kb upstream 10.0kb upstream 24407 true AmTr_v1.0_scaffold00129: 1080800-1105206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00129: 1095207-1105206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 10.0kb downstream 10.0kb downstream 24407 true AmTr_v1.0_scaffold00129: 1070800-1095206 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.65 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00129: 1070800-1080799 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain