Gene : evm_27.TU.AmTr_v1.0_scaffold00129.6 A. trichopoda v1.0
Defline:  (1 of 8) PTHR11353:SF22 - T-COMPLEX PROTEIN 1 SUBUNIT ETA Genomic Order:  6
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00129.6 Secondary Identifier:  ? PAC:31551514
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00129.6 0.5kb upstream 0.5kb upstream 2177 true AmTr_v1.0_scaffold00129: 158516-160692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00129: 158516-159015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 0.5kb downstream 0.5kb downstream 2177 true AmTr_v1.0_scaffold00129: 159016-161192 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00129: 160693-161192 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 1.0kb upstream 1.0kb upstream 2677 true AmTr_v1.0_scaffold00129: 158016-160692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00129: 158016-159015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 1.0kb downstream 1.0kb downstream 2677 true AmTr_v1.0_scaffold00129: 159016-161692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00129: 160693-161692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 2.0kb upstream 2.0kb upstream 3677 true AmTr_v1.0_scaffold00129: 157016-160692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00129: 157016-159015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 2.0kb downstream 2.0kb downstream 3677 true AmTr_v1.0_scaffold00129: 159016-162692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00129: 160693-162692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 5.0kb upstream 5.0kb upstream 6677 true AmTr_v1.0_scaffold00129: 154016-160692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00129: 154016-159015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 5.0kb downstream 5.0kb downstream 6677 true AmTr_v1.0_scaffold00129: 159016-165692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00129: 160693-165692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 10.0kb upstream 10.0kb upstream 11677 true AmTr_v1.0_scaffold00129: 149016-160692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00129: 149016-159015 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 10.0kb downstream 10.0kb downstream 11677 true AmTr_v1.0_scaffold00129: 159016-170692 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.6 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00129: 160693-170692 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049781 5273 Angiosperm View MSA
121344001 5274 Embryophyte View MSA
123424590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain