Gene : evm_27.TU.AmTr_v1.0_scaffold00129.37 A. trichopoda v1.0
Defline:  (1 of 2) PTHR11995:SF19 - NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 7, MITOCHONDRIAL Genomic Order:  36
Name:  ? evm_27.TU.AmTr_v1.0_scaffold00129.37 Secondary Identifier:  ? PAC:31551531
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Atrichopoda PWY-3781 Amborella trichopoda pathologic  
Atrichopoda PWY-4302 Amborella trichopoda pathologic  
Atrichopoda PWY-5083 Amborella trichopoda pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
evm_27.TU.AmTr_v1.0_scaffold00129.37 0.5kb upstream 0.5kb upstream 5999 true AmTr_v1.0_scaffold00129: 650515-656513 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 0.5kb upstream 0.5kb upstream 500 false AmTr_v1.0_scaffold00129: 656014-656513 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 0.5kb downstream 0.5kb downstream 5999 true AmTr_v1.0_scaffold00129: 650015-656013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 0.5kb downstream 0.5kb downstream 500 false AmTr_v1.0_scaffold00129: 650015-650514 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 1.0kb upstream 1.0kb upstream 6499 true AmTr_v1.0_scaffold00129: 650515-657013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 1.0kb upstream 1.0kb upstream 1000 false AmTr_v1.0_scaffold00129: 656014-657013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 1.0kb downstream 1.0kb downstream 6499 true AmTr_v1.0_scaffold00129: 649515-656013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 1.0kb downstream 1.0kb downstream 1000 false AmTr_v1.0_scaffold00129: 649515-650514 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 2.0kb upstream 2.0kb upstream 7499 true AmTr_v1.0_scaffold00129: 650515-658013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 2.0kb upstream 2.0kb upstream 2000 false AmTr_v1.0_scaffold00129: 656014-658013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 2.0kb downstream 2.0kb downstream 7499 true AmTr_v1.0_scaffold00129: 648515-656013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 2.0kb downstream 2.0kb downstream 2000 false AmTr_v1.0_scaffold00129: 648515-650514 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 5.0kb upstream 5.0kb upstream 10499 true AmTr_v1.0_scaffold00129: 650515-661013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 5.0kb upstream 5.0kb upstream 5000 false AmTr_v1.0_scaffold00129: 656014-661013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 5.0kb downstream 5.0kb downstream 10499 true AmTr_v1.0_scaffold00129: 645515-656013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 5.0kb downstream 5.0kb downstream 5000 false AmTr_v1.0_scaffold00129: 645515-650514 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 10.0kb upstream 10.0kb upstream 15499 true AmTr_v1.0_scaffold00129: 650515-666013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 10.0kb upstream 10.0kb upstream 10000 false AmTr_v1.0_scaffold00129: 656014-666013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 10.0kb downstream 10.0kb downstream 15499 true AmTr_v1.0_scaffold00129: 640515-656013 Amborella trichopoda
evm_27.TU.AmTr_v1.0_scaffold00129.37 10.0kb downstream 10.0kb downstream 10000 false AmTr_v1.0_scaffold00129: 640515-650514 Amborella trichopoda

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122050391 5273 Angiosperm View MSA
121349421 5274 Embryophyte View MSA
123381301 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain